
Boutique hotels in Marathon
Find and book unique boutique hotels on Airbnb
Top-rated boutique hotels in Marathon
Guests agree: These boutique hotels are highly rated for location, cleanliness and more.

Large House w/ FREE Sailboat, Kayaks, Snorkel etc
The Main House is a cottage at Key Largo Cottages. We are located on the bay side of Key Largo near some of the best dive/snorkel sites, island excursions, bars, restaurants, & the Everglades. Experience water fun! A stay in one of our cottages comes with unlimited use of our kayaks, canoes, paddle boards, snorkel gear, fishing gear, &, of course, the use of one of our 22' sailboats, if you have recent sailing experience on keel boats! You won't find a better deal in the Keys!

Conch Key Villas #1. Fun, fishing & great sunsets
Studio One's waterfront rental is located on the ground level. Our units differ vastly from other Florida Keys lodgings because our property is right on Florida Bay. If you trailer your boat, the dockage is a few feet from the back door. Our docks can handle boats up to 25’ and you can park your trailer in our front lot. There is a boat ramp just two blocks away. Studio 1 can sleep 2 adults and one child (up to 12 years). We have a king size bed and a futon.

Marathon Oceanfront | ADA Queen + 5 Pools
Experience comfort and accessibility in the Oceanfront Balcony Queen ADA room. Designed for a seamless stay, this ADA-compliant retreat features a queen bed, a fully accessible deluxe bathroom, and a private oceanview terrace. Thoughtful details like wide doors, roll-in shower, and hearing-impaired features ensure ease and relaxation. Enjoy five pools, beachfront dining, and oceanfront luxury in the heart of the Florida Keys.

Marathon Beachfront | 2Kings, Veranda + 2LuxeBaths
Step from your Oceanfront Veranda | 2BR 2Kings guestroom, directly onto the sand for a true beachfront escape. This spacious retreat features two king beds, two deluxe baths, and a private beachfront veranda. Enjoy a spa-like bath with a rainfall shower and soaking tub, plus modern comforts like complimentary WiFi and an entertainment system. Experience five pools, oceanfront dining, and coastal luxury in the Florida Keys.

Marathon Oceanfront Suite | King Bed + Kitchenette
Escape to the Oceanfront Balcony | 1BR King (Suite), where breathtaking ocean views and luxury amenities await. This spacious suite features a plush king bed, a separate living area with a queen sofa bed, a kitchenette, and a spa-like bath with a walk-in rainfall shower. Step onto your private oceanview terrace, and experience five pools, beachfront dining, and endless coastal adventures in the Florida Keys.

Wreckers House King Room - Adults Only
Adults-only building for guests ages 21+ only. Thoughtfully furnished with mixed metals and woods, the Wreckers House tells the story of ships and their crews of "wreckers" who once salvaged goods from the sunken ships in the Florida Keys. Enjoy a sunrise view and an ocean breeze from your private balcony that overlooks the pool and the Atlantic. This room has a mini fridge and an espresso machine.

Family Room in Duck Key | Sauna, Kayak & Pools
Gather the crew in the Family Oasis—a bright, roomy hideaway where bunk beds delight the kids and a plush king bed welcomes parents. Ideal for up to five guests, this relaxing space blends laid-back comfort with family-ready convenience. Located in Hawks Cay Resort, enjoy a full day of waterside fun, unwind in your oversized room, and let island time set the pace for your unforgettable stay.

Marathon Oceanfront Suite | Balcony + Kitchenette
Wake up to stunning ocean views from the Oceanfront Balcony | 1BR King + Kitchenette (Suite). This spacious retreat offers a plush king bed, a separate living area with a queen sofa bed, and a private oceanview terrace. Enjoy a kitchenette, luxurious bath, and seamless indoor-outdoor living. With five pools, beachside dining, and endless adventure, your dream Florida Keys escape begins here.

Marathon Oceanfront Room | 2Queens + Spa-Like Bath
Wake up to breathtaking ocean views in the Oceanfront Balcony | Double Queen room. Featuring two plush queen beds, a spa-like bath with a deep soaking tub and walk-in rainfall shower, and a private oceanview balcony, this retreat offers the perfect blend of comfort and luxury. Experience premium amenities, five breathtaking resort pools, beachfront dining, and an array of endless adventures.

Marathon Oceanfront | 2 King Beds + Balcony
Discover oceanfront luxury in the Oceanfront Balcony | 2BR 2Kings guestroom. This spacious retreat features two king beds, two deluxe bathrooms, and a private oceanview terrace for seamless indoor-outdoor living. Relax with modern comforts like a Smart TV, complimentary WiFi, and an entertainment system, and enjoy five pools, beachfront dining, and endless adventures in the Florida Keys.

Marathon Beachfront | King Bed + Veranda
Wake up to breathtaking ocean views and step directly onto the sand from the Oceanfront Veranda | King room. This luxurious beachfront retreat features a plush king bed, a spa-like bath with a deep soaking tub and walk-in rainfall shower, and a private beachfront veranda. Enjoy modern comforts, five pools, oceanfront dining, and endless adventure in the Florida Keys.

Marathon Beachfront | 2 Queens + Veranda
Wake up to ocean views and direct beach access in the Oceanfront Veranda | Double Queen room in Marathon. This coastal retreat features two queen beds, a spa-like bath with a soaking tub and rainfall shower, and a private beachfront veranda. Enjoy modern amenities, complimentary WiFi, and access to five pools, beachfront dining, and endless Florida Keys adventures.
Popular amenities for Marathon boutique hotels
Family-friendly boutique hotels

Duck Key Trip! | ADA Family Rm w/ Snorkeling + Spa

King ADA w/ Views in Duck Key | Marina, Spa & Pool

Cozy Queen Rm in Duck Key | Sauna & Snorkeling

Tropical Duck Key Escape! | King Rm w/ Pools & Spa

Dbl Queen Room | Pool, Spa & Kayak | No Hidden Fee

Water View Queen Rm w/ Pool & Spa | No Hidden Fee
Boutique hotels with a patio

Resort View Family Suite

Conch Key Villas #1. Fun, fishing & great sunsets

Wreckers House Double Queen Room - Adults Only

Galleon King Suite - Adults Only
Other boutique hotel holiday rentals

Marathon Beachfront | 2 Queens + Veranda

Marathon Oceanfront Suite | King Bed + Kitchenette

Marathon Oceanfront | 2 King Beds + Balcony

Marathon Beachfront | King Bed + Veranda

Marathon Oceanfront Suite | Balcony + 2 Luxe Baths

Conch Key Villas #1. Fun, fishing & great sunsets

Marathon Beachfront | 2Kings, Veranda + 2LuxeBaths

Marathon Oceanfront Suite | Balcony + Kitchenette
Quick stats about boutique hotels in Marathon

Total holiday rentals
Explore 30 holiday rentals in Marathon

Nightly prices starting at
Marathon holiday rentals start at $505 NZD per night before taxes and fees

Verified guest reviews
Over 1,560 verified reviews to help you choose

Pet-friendly accommodation
Find 10 rentals that welcome pets

Holiday rentals with a pool
30 properties feature pools

Rentals with dedicated workspaces
10 properties have a dedicated workspace

Wi-Fi availability
30 of Marathon holiday rentals include Wi-Fi access

Popular amenities for guests
Guests love Kitchen, Wifi and Pool across Marathon rentals

4.7 Average rating
Marathon stays receive an average rating of 4.7 out of 5 from guests
Destinations to explore
- Seminole Holiday rentals
- Central Florida Holiday rentals
- Miami Holiday rentals
- Orlando Holiday rentals
- Gold Coast Holiday rentals
- Miami Beach Holiday rentals
- Fort Lauderdale Holiday rentals
- Havana Holiday rentals
- Tampa Holiday rentals
- Four Corners Holiday rentals
- Kissimmee Holiday rentals
- Key West Holiday rentals
- Villa rentals Marathon
- Rentals with a fireplace Marathon
- Rentals with an accessible height toilet Marathon
- Rentals with a hot tub Marathon
- Waterfront rentals Marathon
- Cottage rentals Marathon
- Rentals with a fire pit Marathon
- House rentals Marathon
- Rentals with a kayak Marathon
- Rentals with lake access Marathon
- Rentals with a washing machine and dryer Marathon
- Beachfront rentals Marathon
- Rentals with an EV charger Marathon
- Family-friendly rentals Marathon
- Beach house rentals Marathon
- Rentals with beach access Marathon
- Condo rentals Marathon
- Luxury rentals Marathon
- Rentals with pools Marathon
- Rentals with a patio Marathon
- Rentals with breakfast Marathon
- Apartment rentals Marathon
- Hotel rooms Marathon
- Rentals with outdoor seating Marathon
- Townhouse rentals Marathon
- Pet-friendly rentals Marathon
- Fitness-friendly rentals Marathon
- Boutique hotels Monroe County
- Boutique hotels Florida
- Boutique hotels United States
- Everglades National Park
- Sombrero Beach
- Smathers Beach
- Ernest Hemingway Home & Museum
- Bahia Honda State Park
- Theater of the Sea
- Seven Mile Bridge
- Calusa Campground
- Robbies Marina Of Islamorada
- The Turtle Hospital
- Florida Keys Aquarium Encounters
- Key West Butterfly & Nature Conservatory
- Fort Zachary Taylor Historic State Park
- Dolphin Research Center
- Founder's Park
- Southernmost Point
- History Of Diving Museum
- Key West Lighthouse Museum
- Harry Harris Beach and Park
- The Rain Barrel Village
- Conch Key
- Mel Fisher Maritime Museum
- Curry Hammock State Park
- Key West Aquarium





