
Boutique hotel holiday rentals in Shinjuku
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Top-Rated Boutique Hotels in Shinjuku
Guests agree: These boutique hotel rentals are highly rated for location, cleanliness and more.
Holiday rentals for every style
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Popular amenities for Shinjuku Boutique Hotels
Family-Friendly Boutique Hotels

2nd Floor Artistic Twin Room Inspired by Noh Dream

Modern queen suite with private bathroom - rooftop

4F Shin-Okachimachi: A charming city where you can enjoy both the city center and downtown. Asakusa Ueno: The starting point of the Asakusa downtown area. Former Asakusa

New hotel/Compact Twin/2 people

Hotel like 1 big house/Standard Twin②/3 people

Elevator, Washing Machine, 5-minute walk to Skytree Station, Airport, Direct to Disney, Kitchen, Amin Hotel

Newly opened hotel-style t suite Subway 3 minutes

Shinjuku 15mins! Max 4ppl! No charge until 2ppl!
Boutique Hotels with a patio

Shibuya direct access to Skytree station 5 min walk 3 suites 3 bathrooms Washing machine Elevator Airport direct access

4 bedrooms, 4 bathrooms, 4 washing machines, 4 kitchens, direct access to the airport, washing machine, elevator building, 5 minutes walk to Skytree station

3 sets of bathrooms MAX14 people Skytree station 5 minutes 3 suite airport direct access to kitchen washing machine elevator

Top floor large terrace with Skytree view, 3 bathrooms, 5 minutes walk to station, direct access to airport, kitchen, washing machine, Amin Hotel

5 min walk to Skytree Station, direct access to airport and Disney, kitchen, washing machine, wifi, elevator, Amin Hotel

Shibuya Direct 5 to Skytree Subway Hike 2 Suites 2 Bathroom Airport Direct Access to Kitchen Washing Machine Elevator

Direct access to the airport, 5 minutes walk to Skytree Station, 2 suites, 2 bathrooms, kitchen, washing machine, elevator, Amin Hotel

TheMillennialsShibuya/Smart Pod Girls Only/1 Guest
Other boutique hotel holiday rentals

Superior Room | Shinjuku20m|Kagurazaka

New Open! 2 bedrooms 1 living room + bar kitchen! Family room for 4-5 people! Sensoji Temple View! Night view of the Skytree from the balcony! Direct access to Haneda & Narita Airport!

Room 202, 3 mins walk from Asakusabashi Station, Asakusa, Akihabara, Ueno neighborhood, kitchenware, kitchen, washing machine, direct access to Haneda and Narita Airport

Executive Room 56㎡|2Q+2SofaBed|20 min Shinjuku

Spacious 3F Loft with Kitchen & Uniqueness Living

The Barn Tokyo - < Double room >

4 single beds in Tokyo/2 train stations : Studio A

New-build/family owned/large rooms/wifi/Queenbed
Quick stats about boutique hotel rentals in Shinjuku
Total rentals
50 properties
Nightly prices starting at
$83 NZD before taxes and fees
Total number of reviews
4.9K reviews
Rentals with dedicated workspaces
10 properties have a dedicated workspace
Wi-Fi availability
50 properties include access to Wi-Fi
Popular amenities
Kitchen, Wi-Fi and Pool
Destinations to explore
- Pet-friendly rentals Shinjuku
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- Condo rentals Shinjuku
- Rentals with a washing machine and dryer Shinjuku
- Family-friendly rentals Shinjuku
- Villa rentals Shinjuku
- Rentals with outdoor seating Shinjuku
- Rentals with a hot tub Shinjuku
- Rentals with a patio Shinjuku
- Rentals with a fireplace Shinjuku
- Aparthotel rentals Shinjuku
- Rentals with a home theatre Shinjuku
- Apartment rentals Shinjuku
- Rentals with breakfast Shinjuku
- Waterfront rentals Shinjuku
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- Boutique hotel rentals Tokyo Prefecture
- Boutique hotel rentals Japan
- Asakusa Sta.
- Oshiage Sta.
- Senso-ji Temple
- Tokyo Skytree
- Akihabara Sta.
- Kinshicho Sta.
- Shibuya Station
- Tokyo Disney Resort
- Ikebukuro Station
- Ueno Sta.
- Nippori Sta.
- Tokyo Sta.
- Tokyo Disneyland
- Tokyo Tower
- Kamakura Yuigahama Beach
- Yoyogi Park
- Shimo-Kitazawa Sta.
- Koenji Station
- Tokyo Dome
- Otsuka Station
- Kamata Sta.
- Shinagawa Station
- Makuhari Station
- Yokohama Sta.
- Things to do Shinjuku
- Art and culture Shinjuku
- Sports activities Shinjuku
- Sightseeing Shinjuku
- Tours Shinjuku
- Food and drink Shinjuku
- Entertainment Shinjuku
- Things to do Tokyo Prefecture
- Sports activities Tokyo Prefecture
- Tours Tokyo Prefecture
- Entertainment Tokyo Prefecture
- Nature and outdoors Tokyo Prefecture
- Sightseeing Tokyo Prefecture
- Art and culture Tokyo Prefecture
- Food and drink Tokyo Prefecture
- Wellness Tokyo Prefecture
- Things to do Japan
- Food and drink Japan
- Entertainment Japan
- Nature and outdoors Japan
- Tours Japan
- Sightseeing Japan
- Wellness Japan
- Sports activities Japan
- Art and culture Japan