Boutique hotels in Wisconsin River

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Top-rated boutique hotels in Wisconsin River

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An elegant corner is highlighted by a dark fireplace topped with decorative items. Two upholstered chairs with soft beige fabric flank the fireplace, creating a cozy seating area. Framed artwork adorns the walls, adding character to the space.
Hotel room in Mazomanie
5 out of 5 average rating, 6 reviews

The Doctors Study - Iron Amethyst Inn

Enter the Doctor’s Study through a re-created turn-of-the-century study – medical journals and top hat neatly hung up, a crank wall phone and calendar look as if the doctor just returned from a house call. Step under the arch and into the bedroom with queen-size brass bed with cast cherubs, past the remote-controlled fireplace, and into your cozy private bath. This bath has the best of both worlds with it’s large two-person shower featuring separate controls, body sprays, and the hand-made English tile version of “A Coign of Vantage” by Lawrence Alma-Tadema make this the ultimate showering experience! Step around the corner to enjoy the large double whirlpool bath, Doc Kester’s remedy to all that ails you. Located on the first floor.

Guest favourite
The historic Burlington Hotel features a striking red brick facade with white accents, showcasing a classic balcony on the second level. The entrance is framed by windows, while colorful flowers line the base, contributing to a welcoming atmosphere. Trees and greenery are visible in the background.
Hotel room in Alma
4.96 out of 5 average rating, 24 reviews

ALL 5 BEDROOMS !! - Burlington Hotel & Bar

The Burlington Hotel & Bar was built with 12 sleeping rooms for railroad workers in 1891. Located in Alma along the Mississippi River and still along active railroad tracks, it was added to the National Register of Historical Places in 1982. The hotel now features 5 bedrooms for up to 12 guests, a bar & a shop called 'Queen Bee Alma' offering crochet & craft classes. Location: 1/2 mile from the marina/beach, a few doors down from Kwik Trip, and a short walk to the bars & shops, downtown Alma.

Guest favourite
The room features a queen bed with a textured headboard against a light wall. A window offers views of the surrounding greenery, and a television is mounted on the opposite wall. Additional details include a bedside lamp and a small shelving unit.
Hotel room in Lanesboro
5 out of 5 average rating, 5 reviews

Root River Inn, Whalan En Suite

This room, named after the smallest town on the Root River Trail, is our smallest room. Perfect if you just plan to sleep here an be out enjoying the day. There is a bench and a stool in the room. This room has a window overlooking main street. You can see the bike trail and the bridge from your room. Recline in your queen bed and watch the Roku TV where you can watch many free channels or log into your own services. This room has the sink in the room and toilet and shower in the bathroom.

Guest favourite
The exterior of the historic American House Inn is depicted, showcasing its vintage brick façade and prominent entrance. Large glass windows allow views of the surrounding area, while a plaque indicating the year 1854 is visible above the door. Seating is available on the sidewalk.
Hotel room in McGregor
4.9 out of 5 average rating, 21 reviews

American House 1854- Stagecoach Stop Suite

Take in the beauty of the Mississippi River at this unique and tranquil getaway. The American House Inn is the oldest standing building in McGregor, IA. Built in 1854, this building is on the National Registry of Historic Places and takes you back to the late 1800s but with modern amenities. Located just across the street from Big Bouys Marina, Kwik Star and a block from the Sadie’s Sweet Ice Cream shop! You don’t want to miss enjoying all of the history and the beauty of this vintage gem!

Guest favourite
A bright corner showcases a modern white chair set against textured black walls. A vibrant artwork featuring a blue face decorates the door, while another colorful painting adds visual interest nearby. Natural light enters through a tall window, illuminating the polished concrete floor.
Hotel room in Sparta
4.94 out of 5 average rating, 18 reviews

b3 Room1: Awareness King Suite

Where creativity meets comfort, where art inspires at every corner, and every detail is designed to bring you joy. Welcome to b3experience, a one-of-a-kind art-inspired micro-hotel in the heart of Sparta, Wisconsin. Whether you seek adventure or tranquility, b3experience offers unforgettable memories. Rent a single suite for a business trip or romantic weekend, or bring your friends and rent multiple of our 4 private suites, each with their own private full bathroom, for a unique getaway!

Guest favourite
The room features a cozy seating area with a plush couch, complemented by a spacious bed adorned with floral bedding. A Jacuzzi tub is positioned nearby, offering convenience for relaxation. Natural light enters through the window, illuminating the wooden floors and charming decor.
Hotel room in Alma
4.96 out of 5 average rating, 28 reviews

The Tritsch House Walser Room

Enjoy a private room in this fully remodeled 1902 Queen Anne. The Walser Room has a private bathroom with shower, as well as a Jacuzzi tub. Guests have access to all of the main level common areas including the parlor, living and dining rooms, and any one of the three porches. Two of these porches have Mississippi River views. Guests also love hanging out in the newly remodeled kitchen. Sorry, but microwave only cooking. This is not a bed and breakfast and breakfast is not provided.

A cozy sitting area features two blue chairs positioned near large windows adorned with light blue curtains. The view showcases a tree-lined street and a glimpse of nearby buildings. A small table rests between the chairs, enhancing the inviting nature of the space.
Hotel room in Wabasha
4.71 out of 5 average rating, 14 reviews

AH #25 King Suite w/Jacuzzi/Shower/Fridge/Micro

We think you will find our historic hotel charming with authentic period furniture and cozy rooms with modern amenities. Modern amenities include as central air and heating, WIFI, flat screen TVs and private bathrooms. Be sure to make a reservation with the front desk to relax in our new Sauna Room located on the 2nd floor. We’re located near local businesses including a quaint coffee shop just behind the hotel, multiple restaurants and shops all located near the Mississippi River.

A spacious room is equipped with a large bed adorned with several pillows, accompanied by wooden side tables with lamps. A reading chair and a desk area are included, along with windows that allow natural light to illuminate the room.
Hotel room in Spring Green
4.53 out of 5 average rating, 118 reviews

Private room with backyard view - 2 beds

Our place is close to many touristic attractions; we are on the Frank Lloyd Wright TRAIL, Taliesin, WI River, restaurants and dining, family-friendly activities, parks, theater, shopping, downtown within walking distance. You’ll love our place because is well known for having an architectural organic design, the ambiance, the history, we can offer a different experience, dining table inside, the outdoors space. My place is good for couples, solo adventurers and business travelers.

The welcoming lobby features a large stone fireplace surrounded by comfortable seating, including a full-size sofa and armchairs. A decorative coffee table sits centrally, adorned with floral arrangements and vases. Natural light flows from nearby windows, contributing to a warm ambiance.
Hotel room in La Crosse
4.57 out of 5 average rating, 133 reviews

Suite in Hotel

The GrandStay Hotel & Suites La Crosse is located in beautiful downtown, steps from the Mississippi River and International Friendship Gardens. Our One Bedroom Suite offers a queen size bed in a separate bedroom, full kitchen with place settings for four and table with two chairs . In the living area of the suite guests can relax on a full size sofa sleeper and club chair with ottoman. We offer complimentary Grand Start Breakfast, free internet and free parking.

Guest favourite
A cozy sleeping area features a spacious bed with white bedding and two pillows. Soft lighting from wall sconces enhances the natural wood accents of the room. An air conditioning unit is visible on the wall, and a small table can be seen near the bed.
Hotel room in Tomahawk
4.94 out of 5 average rating, 33 reviews

Bridge Inn 2nd Floor1 KingBed Balcony River View

Every Room with a Beautiful View of The Wisconsin River / Snowmobile Trail Access / UTV/ATV Trail Access / Boat Launch / Walking Distance to Restaurant, bar & Shopping / Kwahamot Waterski Shows from Memorial Day to Labor Day / Plenty of Parking / Open Year-Round / Family Owned & Operated. --- Cable TV / Wi-Fi / In-Room Heat & Air-Con, Fridge, and Microwave Oven --- Virtual Reception / Smart Lock / Self-Check In --- Pets Allowed on Request.

Guest favourite
A well-lit room features a queen bed with neutral bedding and a decorative headboard. Two bedside lamps provide warm light beside the bed. A vintage painting adorns the wall above a dresser, and a comfortable chair is positioned by the window, which allows natural light to enter.
Hotel room in Madison
4.92 out of 5 average rating, 171 reviews

Governor's Mansion Inn - Rusk Room

Queen room in a historic downtown boutique hotel that was the first official Governor's Mansion of Wisconsin. There were 17 sitting governors that lived here while in office, including Fighting Bob La Follette, the founder of the Progressive Party. We provide complimentary scones, coffee, fruit and tea each morning in the dining room. Free onsite parking. Discounts are available at Governors Mansion Inn Madison.

A cozy hotel room features two queen beds with neutral-toned bedding and decorative throw blankets. A wooden dresser and a comfortable chair are present, while wall art and soft lighting create a relaxed atmosphere. A window allows natural light to enter the space.
Hotel room in Onalaska
4.8 out of 5 average rating, 5 reviews

Deluxe 2 Queen, Stoney Creek Onalaska, Parking

Explore Vibrant La Crosse: Downtown shopping, dining & cultural scene. Scenic bluffs, hiking, biking & paddling in the Mighty Mississippi River! Immerse in local art, music & theater scenes. Conveniently located near attractions. Discover the adventure of La Crosse, WI!

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